Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032970_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4066580 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 5450 | 0.0 | 36.135944 | 1 |
GGTATCA | 3445 | 0.0 | 34.92791 | 1 |
TCAACGC | 5610 | 0.0 | 33.932358 | 4 |
CAACGCA | 5790 | 0.0 | 32.7143 | 5 |
ATCAACG | 5825 | 0.0 | 32.599224 | 3 |
AACGCAG | 6005 | 0.0 | 31.621286 | 6 |
GTACATG | 14575 | 0.0 | 29.507635 | 1 |
TACATGG | 14810 | 0.0 | 27.896881 | 2 |
TATCAAC | 6960 | 0.0 | 27.890911 | 2 |
ACATGGG | 15035 | 0.0 | 26.885422 | 3 |
ACGCAGA | 7590 | 0.0 | 24.460865 | 7 |
CGCAGAG | 8085 | 0.0 | 22.905127 | 8 |
GAGTACA | 10075 | 0.0 | 22.020075 | 1 |
CATGGGG | 10715 | 0.0 | 21.976948 | 4 |
AGTACAT | 10330 | 0.0 | 20.020468 | 2 |
CCTATAC | 1590 | 0.0 | 18.919283 | 3 |
GCAGAGT | 9555 | 0.0 | 18.889118 | 9 |
CATGGGA | 4930 | 0.0 | 18.114592 | 4 |
GTATAGG | 1795 | 0.0 | 17.805998 | 1 |
TACGCGC | 220 | 3.196928E-5 | 17.091433 | 6 |