Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032969_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2967164 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4480 | 0.0 | 34.517735 | 1 |
TCAACGC | 4565 | 0.0 | 32.639458 | 4 |
ATCAACG | 4650 | 0.0 | 31.84066 | 3 |
CAACGCA | 4730 | 0.0 | 31.797915 | 5 |
AACGCAG | 4940 | 0.0 | 30.350525 | 6 |
GGTATCA | 2830 | 0.0 | 30.061909 | 1 |
TATCAAC | 5445 | 0.0 | 27.623362 | 2 |
GTACATG | 9475 | 0.0 | 25.398916 | 1 |
ACGCAGA | 5870 | 0.0 | 24.981525 | 7 |
TACATGG | 9350 | 0.0 | 24.53198 | 2 |
CGCAGAG | 6120 | 0.0 | 23.577045 | 8 |
GTCGTAC | 220 | 2.4538167E-9 | 23.501438 | 1 |
ACATGGG | 9455 | 0.0 | 23.265306 | 3 |
CGTACAC | 320 | 2.0008883E-11 | 20.563759 | 3 |
GCAGAGT | 7320 | 0.0 | 19.069553 | 9 |
ACACCGT | 475 | 0.0 | 18.800198 | 6 |
GCGTATG | 265 | 4.4792432E-7 | 17.736933 | 1 |
GAGTACA | 7000 | 0.0 | 17.525358 | 1 |
CATGGGG | 6170 | 0.0 | 17.44515 | 4 |
CGTAAGG | 300 | 8.673669E-8 | 17.234388 | 3 |