Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032966_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3278724 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 11350 | 0.0 | 28.739132 | 1 |
TACATGG | 11805 | 0.0 | 26.317554 | 2 |
GTATCAA | 6475 | 0.0 | 26.204597 | 1 |
ACATGGG | 11595 | 0.0 | 25.334906 | 3 |
TCAACGC | 6545 | 0.0 | 25.20621 | 4 |
ATCAACG | 6735 | 0.0 | 24.564907 | 3 |
CAACGCA | 6730 | 0.0 | 24.51257 | 5 |
AACGCAG | 6920 | 0.0 | 23.771618 | 6 |
GGTATCA | 4540 | 0.0 | 23.190077 | 1 |
TATCAAC | 7630 | 0.0 | 21.991442 | 2 |
CATGGGG | 7795 | 0.0 | 21.767128 | 4 |
ACGCAGA | 8170 | 0.0 | 19.84695 | 7 |
ACCGCGT | 215 | 1.1954035E-6 | 19.674372 | 8 |
GAGTACA | 8150 | 0.0 | 19.319561 | 1 |
CGCAGAG | 8530 | 0.0 | 19.064434 | 8 |
TACCTGG | 2145 | 0.0 | 18.844353 | 2 |
AGTACAT | 8480 | 0.0 | 17.902624 | 2 |
GTATAGA | 1355 | 0.0 | 17.690533 | 1 |
GCGTTAG | 160 | 0.001279038 | 17.625496 | 1 |
CATGGGA | 3735 | 0.0 | 17.11427 | 4 |