Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032965_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3150161 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4785 | 0.0 | 37.03138 | 1 |
GGTATCA | 2895 | 0.0 | 34.581318 | 1 |
TCAACGC | 4910 | 0.0 | 34.078384 | 4 |
ATCAACG | 5040 | 0.0 | 33.47915 | 3 |
CAACGCA | 5080 | 0.0 | 32.937965 | 5 |
AACGCAG | 5355 | 0.0 | 31.422016 | 6 |
TATCAAC | 5870 | 0.0 | 28.985512 | 2 |
GTACATG | 10825 | 0.0 | 28.960659 | 1 |
TACATGG | 10840 | 0.0 | 26.8827 | 2 |
ACGCAGA | 6270 | 0.0 | 26.38673 | 7 |
ACATGGG | 11255 | 0.0 | 25.0145 | 3 |
CGCAGAG | 6600 | 0.0 | 24.924967 | 8 |
CATGGGG | 7765 | 0.0 | 21.42754 | 4 |
GCAGAGT | 7905 | 0.0 | 20.334232 | 9 |
GAGTACA | 8090 | 0.0 | 20.27624 | 1 |
AGTACAT | 8060 | 0.0 | 19.068792 | 2 |
CATGGGA | 3625 | 0.0 | 17.374298 | 4 |
GTATAGG | 1330 | 0.0 | 17.316292 | 1 |
GTGGTAT | 1910 | 0.0 | 17.225632 | 1 |
GTATAGA | 1320 | 0.0 | 16.735334 | 1 |