Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032961_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2844232 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4155 | 0.0 | 37.442146 | 1 |
TCAACGC | 4105 | 0.0 | 35.495033 | 4 |
ATCAACG | 4295 | 0.0 | 34.033062 | 3 |
CAACGCA | 4335 | 0.0 | 33.826855 | 5 |
GGTATCA | 2510 | 0.0 | 32.956627 | 1 |
AACGCAG | 4555 | 0.0 | 32.089886 | 6 |
TATCAAC | 5135 | 0.0 | 29.198063 | 2 |
GTACATG | 9225 | 0.0 | 27.56352 | 1 |
ACGCAGA | 5575 | 0.0 | 26.050121 | 7 |
TACATGG | 9290 | 0.0 | 25.852884 | 2 |
CGCAGAG | 5830 | 0.0 | 24.507622 | 8 |
ACATGGG | 9520 | 0.0 | 24.339617 | 3 |
TACCGTC | 220 | 6.315531E-8 | 21.363552 | 7 |
CATGGGG | 6300 | 0.0 | 20.36766 | 4 |
GCAGAGT | 6875 | 0.0 | 20.167194 | 9 |
GAGTACA | 6630 | 0.0 | 19.424095 | 1 |
TATACCG | 220 | 1.4898324E-6 | 19.227196 | 5 |
CATGGGA | 3240 | 0.0 | 18.278671 | 4 |
GTATACG | 235 | 2.798759E-6 | 18.000246 | 1 |
AGTACAT | 6790 | 0.0 | 17.166656 | 2 |