Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032947_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3942107 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 12535 | 0.0 | 30.034317 | 1 |
TACATGG | 12465 | 0.0 | 28.506186 | 2 |
ACATGGG | 12770 | 0.0 | 26.500324 | 3 |
GTATCAA | 7780 | 0.0 | 22.896505 | 1 |
TCAACGC | 7720 | 0.0 | 21.978575 | 4 |
CAACGCA | 7960 | 0.0 | 21.31536 | 5 |
ATCAACG | 7995 | 0.0 | 21.222586 | 3 |
CATGGGG | 9215 | 0.0 | 21.014132 | 4 |
AACGCAG | 8165 | 0.0 | 20.664543 | 6 |
TATCAAC | 8920 | 0.0 | 19.70681 | 2 |
TACACCG | 880 | 0.0 | 19.227304 | 5 |
GAGTACA | 8505 | 0.0 | 18.568401 | 1 |
ACACCGT | 915 | 0.0 | 18.491364 | 6 |
GGTATCA | 6005 | 0.0 | 18.002151 | 1 |
CATGGGA | 4360 | 0.0 | 17.89498 | 4 |
ACGCAGA | 9685 | 0.0 | 17.27579 | 7 |
AGTACAT | 8700 | 0.0 | 16.855627 | 2 |
CGCAGAG | 9995 | 0.0 | 16.645716 | 8 |
AGAGTAC | 7425 | 0.0 | 15.5395 | 10-11 |
GTATTAG | 1805 | 0.0 | 15.363295 | 1 |