Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032944_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4133638 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4045 | 0.0 | 33.580597 | 1 |
GTATCAA | 6005 | 0.0 | 33.42135 | 1 |
TCAACGC | 5830 | 0.0 | 32.73234 | 4 |
ATCAACG | 6020 | 0.0 | 31.776955 | 3 |
CAACGCA | 6060 | 0.0 | 31.411705 | 5 |
AACGCAG | 6460 | 0.0 | 29.539106 | 6 |
GTACATG | 12530 | 0.0 | 27.120415 | 1 |
TATCAAC | 7220 | 0.0 | 26.885738 | 2 |
TACATGG | 12380 | 0.0 | 25.8165 | 2 |
ACGCAGA | 7450 | 0.0 | 25.298336 | 7 |
CGCAGAG | 7495 | 0.0 | 25.021025 | 8 |
ACATGGG | 12920 | 0.0 | 23.719168 | 3 |
CATGGGG | 8235 | 0.0 | 19.063492 | 4 |
GCAGAGT | 9385 | 0.0 | 19.03063 | 9 |
GAGTACA | 9580 | 0.0 | 18.64349 | 1 |
AGTACAT | 9575 | 0.0 | 17.278776 | 2 |
GTCGTAC | 280 | 7.977105E-7 | 16.78615 | 1 |
TCGCGTA | 230 | 4.6802277E-5 | 16.348051 | 9 |
GTATTAG | 2145 | 0.0 | 16.214872 | 1 |
CAGAGTA | 9290 | 0.0 | 15.885925 | 10-11 |