Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032941_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2524242 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2660 | 0.0 | 33.21804 | 1 |
GTATCAA | 3880 | 0.0 | 31.25257 | 1 |
TCAACGC | 3900 | 0.0 | 29.646147 | 4 |
GTACATG | 8190 | 0.0 | 29.037846 | 1 |
CAACGCA | 3990 | 0.0 | 28.859642 | 5 |
ATCAACG | 4010 | 0.0 | 28.832912 | 3 |
AACGCAG | 4110 | 0.0 | 28.245737 | 6 |
TACATGG | 8255 | 0.0 | 27.385822 | 2 |
ACATGGG | 8430 | 0.0 | 26.37129 | 3 |
TATCAAC | 4745 | 0.0 | 24.861954 | 2 |
ACGCAGA | 4780 | 0.0 | 24.18828 | 7 |
CGCAGAG | 5090 | 0.0 | 22.438108 | 8 |
GAGTACA | 5730 | 0.0 | 21.900518 | 1 |
TACACCG | 410 | 0.0 | 21.780483 | 5 |
CATGGGG | 5780 | 0.0 | 21.548437 | 4 |
ACACCGT | 475 | 0.0 | 20.778942 | 6 |
AGTACAT | 6050 | 0.0 | 18.566938 | 2 |
GCAGAGT | 6010 | 0.0 | 18.3777 | 9 |
CATGGGA | 2815 | 0.0 | 17.865005 | 4 |
TAGACTG | 980 | 0.0 | 16.785711 | 5 |