Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032927_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2868047 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 3985 | 0.0 | 38.56801 | 1 |
GGTATCA | 2390 | 0.0 | 36.57824 | 1 |
TCAACGC | 4065 | 0.0 | 35.727753 | 4 |
ATCAACG | 4085 | 0.0 | 35.66789 | 3 |
CAACGCA | 4310 | 0.0 | 33.696823 | 5 |
AACGCAG | 4460 | 0.0 | 32.458138 | 6 |
TATCAAC | 4850 | 0.0 | 30.52647 | 2 |
GTACATG | 10530 | 0.0 | 29.19155 | 1 |
TACATGG | 10400 | 0.0 | 28.245838 | 2 |
ACATGGG | 10410 | 0.0 | 27.135107 | 3 |
ACGCAGA | 5725 | 0.0 | 25.20407 | 7 |
CGCAGAG | 6065 | 0.0 | 23.558657 | 8 |
TAGACCG | 100 | 0.001759084 | 23.500536 | 5 |
ATACCGT | 350 | 0.0 | 21.486206 | 6 |
CATGGGG | 7000 | 0.0 | 21.150482 | 4 |
GCAGAGT | 7070 | 0.0 | 19.744438 | 9 |
TATACCG | 240 | 1.5815385E-7 | 19.583778 | 5 |
GAGTACA | 7610 | 0.0 | 19.393347 | 1 |
CATGGGA | 3645 | 0.0 | 19.084112 | 4 |
ACACCGT | 575 | 0.0 | 17.983019 | 6 |