Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032922_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4157576 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 4855 | 0.11677477453208311 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 14620 | 0.0 | 29.094873 | 1 |
TACATGG | 14665 | 0.0 | 27.81973 | 2 |
ACATGGG | 14895 | 0.0 | 25.843935 | 3 |
GAGTACA | 9955 | 0.0 | 22.662888 | 1 |
CATGGGG | 10535 | 0.0 | 20.567509 | 4 |
TATACTG | 2140 | 0.0 | 20.206173 | 5 |
AGTACAT | 10420 | 0.0 | 20.162996 | 2 |
CGCGCGT | 430 | 0.0 | 19.67497 | 7 |
GTATCAA | 11110 | 0.0 | 18.953054 | 1 |
TAGCGCG | 450 | 0.0 | 18.800755 | 4 |
GCGTTAG | 275 | 3.2077878E-8 | 18.800753 | 1 |
TCAACGC | 11135 | 0.0 | 18.31955 | 4 |
GTATAGA | 1445 | 0.0 | 18.215263 | 1 |
CAACGCA | 11245 | 0.0 | 18.181923 | 5 |
ATCAACG | 11365 | 0.0 | 17.948805 | 3 |
AACGCAG | 11585 | 0.0 | 17.607744 | 6 |
ACACCGT | 855 | 0.0 | 17.591137 | 6 |
CGTTAGG | 225 | 3.8761533E-5 | 16.71178 | 2 |
TATCAAC | 12375 | 0.0 | 16.635817 | 2 |
GTGTAAG | 1675 | 0.0 | 16.555887 | 1 |