Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032919_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2542426 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4470 | 0.0 | 28.284693 | 1 |
TCAACGC | 4375 | 0.0 | 27.717678 | 4 |
ATCAACG | 4425 | 0.0 | 27.61638 | 3 |
GTACATG | 7950 | 0.0 | 27.136398 | 1 |
CAACGCA | 4490 | 0.0 | 27.006699 | 5 |
AACGCAG | 4640 | 0.0 | 26.133636 | 6 |
TACATGG | 8080 | 0.0 | 25.478241 | 2 |
ACATGGG | 8025 | 0.0 | 24.891472 | 3 |
GGTATCA | 3055 | 0.0 | 24.154335 | 1 |
TATCAAC | 5215 | 0.0 | 23.97364 | 2 |
ACGCAGA | 5520 | 0.0 | 21.71197 | 7 |
CGCAGAG | 5625 | 0.0 | 21.056013 | 8 |
GAGTACA | 5825 | 0.0 | 20.333462 | 1 |
GTATAGA | 1265 | 0.0 | 20.063648 | 1 |
CATGGGG | 5010 | 0.0 | 19.044674 | 4 |
GTTAGAC | 425 | 0.0 | 18.80038 | 3 |
AGTACAT | 5840 | 0.0 | 18.752092 | 2 |
CATGGGA | 2890 | 0.0 | 17.564716 | 4 |
GCGAGTA | 215 | 2.6243553E-5 | 17.488382 | 9 |
TTACGGT | 190 | 2.0234653E-4 | 17.316483 | 4 |