Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032915_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3259256 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 6115 | 0.0 | 28.055294 | 1 |
GTACATG | 11320 | 0.0 | 27.238039 | 1 |
GGTATCA | 4270 | 0.0 | 26.308035 | 1 |
TCAACGC | 6170 | 0.0 | 26.053097 | 4 |
TACATGG | 11210 | 0.0 | 25.95395 | 2 |
ATCAACG | 6330 | 0.0 | 25.69158 | 3 |
CAACGCA | 6390 | 0.0 | 25.302067 | 5 |
AACGCAG | 6540 | 0.0 | 24.57726 | 6 |
ACATGGG | 11400 | 0.0 | 24.531862 | 3 |
TATCAAC | 7420 | 0.0 | 22.867659 | 2 |
CATGGGG | 7545 | 0.0 | 20.993706 | 4 |
ACGCAGA | 7795 | 0.0 | 20.56001 | 7 |
CGCAGAG | 8160 | 0.0 | 19.352074 | 8 |
GAGTACA | 8165 | 0.0 | 18.939047 | 1 |
AGTACAT | 8045 | 0.0 | 17.76094 | 2 |
TATAGCG | 160 | 0.0012788711 | 17.625834 | 2 |
GTGTAAG | 1390 | 0.0 | 17.583567 | 1 |
CGCCGTA | 405 | 3.274181E-11 | 17.406094 | 94 |
TAGACCG | 190 | 2.0242856E-4 | 17.315811 | 5 |
TATACCG | 220 | 3.197418E-5 | 17.09093 | 5 |