Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032912_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2477453 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 6096 | 0.24605915833721165 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 4671 | 0.18854040823377882 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 2680 | 0.10817561422961405 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4515 | 0.0 | 42.772865 | 1 |
GTATCAA | 7750 | 0.0 | 39.287792 | 1 |
ATCAACG | 9450 | 0.0 | 31.809893 | 3 |
TCAACGC | 9485 | 0.0 | 31.642916 | 4 |
CAACGCA | 9675 | 0.0 | 31.10995 | 5 |
TATCAAC | 9810 | 0.0 | 30.78642 | 2 |
AACGCAG | 10050 | 0.0 | 30.042114 | 6 |
GTACATG | 9175 | 0.0 | 27.75732 | 1 |
TACATGG | 9170 | 0.0 | 26.932901 | 2 |
ACGCAGA | 11660 | 0.0 | 25.772411 | 7 |
CGCAGAG | 11970 | 0.0 | 25.025873 | 8 |
ACATGGG | 9475 | 0.0 | 24.824696 | 3 |
GCAGAGT | 13265 | 0.0 | 22.41464 | 9 |
TACACCG | 465 | 0.0 | 21.239126 | 5 |
CATGGGG | 6460 | 0.0 | 20.754177 | 4 |
CGTATAC | 205 | 7.501403E-7 | 20.652937 | 3 |
AGAGTAC | 11340 | 0.0 | 20.399921 | 10-11 |
GAGTACT | 7595 | 0.0 | 20.347141 | 12-13 |
AGTACTT | 7695 | 0.0 | 19.991161 | 12-13 |
GAGTACA | 6820 | 0.0 | 19.084454 | 1 |