Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032910_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2517021 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2590 | 0.0 | 30.305902 | 1 |
GTATCAA | 3710 | 0.0 | 30.278511 | 1 |
GTACATG | 9185 | 0.0 | 29.62852 | 1 |
TACATGG | 8915 | 0.0 | 29.049643 | 2 |
TCAACGC | 3810 | 0.0 | 27.880077 | 4 |
ACATGGG | 9200 | 0.0 | 27.127966 | 3 |
ATCAACG | 4030 | 0.0 | 26.591347 | 3 |
CAACGCA | 4055 | 0.0 | 26.194546 | 5 |
AACGCAG | 4315 | 0.0 | 24.724625 | 6 |
TATCAAC | 4740 | 0.0 | 23.00489 | 2 |
GAGTACA | 6400 | 0.0 | 21.517817 | 1 |
CATGGGA | 3285 | 0.0 | 20.74642 | 4 |
ACGCAGA | 5190 | 0.0 | 20.465658 | 7 |
CATGGGG | 5590 | 0.0 | 20.263561 | 4 |
CGCGCGT | 235 | 1.267399E-7 | 19.999392 | 7 |
GTATAGA | 990 | 0.0 | 19.939976 | 1 |
TATACCG | 165 | 6.8635185E-5 | 19.939182 | 5 |
AGTACAT | 6640 | 0.0 | 19.395144 | 2 |
CGCAGAG | 5455 | 0.0 | 19.299137 | 8 |
TACACCG | 490 | 0.0 | 19.183472 | 5 |