SRR940154_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR940154_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	247875
Sequences flagged as poor quality	0
Sequence length	125
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5020	2.025214321734745	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1882	0.7592536560766515	No Hit
GAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1599	0.6450832072617246	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1136	0.4582955118507312	No Hit
GAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	821	0.3312153303076147	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	776	0.3130610186585981	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	615	0.24810892586989408	No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT	451	0.18194654563792234	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	443	0.17871911245587493	No Hit
AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	331	0.1335350479072113	No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	314	0.12667675239536055	No Hit
ACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	294	0.11860816944024206	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	275	0.11094301563287948	No Hit
CGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCT	265	0.10690872415532021	No Hit
GTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTT	264	0.10650529500756428	No Hit
GTACATGGGATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGG	261	0.10529500756429652	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	715	0.0	81.5483	1
GTATCAA	1575	0.0	65.352234	1
GCCAATC	15	0.0042359857	59.496975	82-83
GATAGTC	50	7.43706E-6	59.496975	7
GAACAAA	700	0.0	57.797062	1
CGCAAAG	45	3.166866E-4	52.8862	2
CGTCACT	35	0.007790648	50.997406	1
GATTGGC	115	2.728484E-10	46.562847	9
CATATAG	65	3.513208E-5	45.766907	3
ATCAACG	2075	0.0	44.44352	3
GTACATG	3220	0.0	44.34557	1
TCAACGC	2095	0.0	44.01924	4
GTCACTA	55	8.517576E-4	43.270527	1
GGTTAAC	55	8.517576E-4	43.270527	1
CAACGCA	2140	0.0	43.0936	5
AACGCAG	2125	0.0	42.837822	6
TCCGCCA	35	5.4491033E-5	42.497837	36-37
CGACCGT	35	5.4491033E-5	42.497837	18-19
TACATGG	3270	0.0	42.211918	2
TATCAAC	2445	0.0	41.61138	2