SRR940047_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR940047_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	469224
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8882	1.892912553492575	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6631	1.4131843213475868	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4295	0.9153410737728676	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1847	0.3936286293966208	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1548	0.3299063986496854	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1110	0.2365607897294256	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	992	0.21141288595638758	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	979	0.20864235418478166	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	571	0.1216902801220739	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2380	0.0	82.00612	1
TAACGCA	100	0.0	65.641014	4
GTATCAA	5035	0.0	61.760918	1
ATAACGC	100	1.8189894E-12	59.67365	3
CCATACG	15	0.0042375573	59.49558	74-75
TATCACG	45	3.1237132E-4	53.043247	2
TGGTATC	780	0.0	51.258137	2
GTGGTAT	770	0.0	50.384636	1
TATAACG	120	7.2759576E-12	49.72804	2
TATCAAC	6630	0.0	47.072884	2
ATCAACG	6655	0.0	46.62704	3
TCAACGC	6715	0.0	46.21042	4
CAACGCA	6790	0.0	45.777897	5
AACGCAG	7035	0.0	44.324562	6
CGCTACG	35	5.4535958E-5	42.49684	32-33
ACGCAGA	8100	0.0	38.33751	7
CGCAGAG	8140	0.0	37.92987	8
ACAACGC	65	0.0019101998	36.722248	3
GCAGAGT	8635	0.0	35.548866	9
GTACATG	3975	0.0	35.13615	1