SRR938667_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938667_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2125758
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5150	0.2422665232825185	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4128	0.19418955497286144	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	2951	0.13882106994305088	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	2830	0.1331289826969956	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2723	0.12809548405792193	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	2584	0.12155664003146172	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	2549	0.1199101685140077	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	2324	0.10932570875894622	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	2193	0.10316320107933265	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	2167	0.1019401079520811	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	2152	0.10123447730174366	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3000	57.074093	1
GTATCAA	5830	46.174862	1
ATCAACG	7515	35.187897	3
TATCAAC	7680	34.43191	2
TCAACGC	7690	34.26344	4
CAACGCA	7820	33.69384	5
AACGCAG	8090	32.54325	6
TGGTATC	1355	29.484074	2
ACGCAGA	9345	27.919855	7
CGCAGAG	9540	27.29935	8
TACATGG	7095	24.46741	2
GTACATG	7385	24.022383	1
GCAGAGT	10610	23.739996	9
GTGGTAT	1930	23.657652	1
ACATGGG	7385	22.218569	3
GAGTACT	6270	21.59963	12-13
CAGAGTA	9760	21.03531	10-11
AGAGTAC	9440	20.892534	10-11
GTACTTT	6645	19.982204	14-15
AGTACTT	6600	19.799662	12-13