SRR938664_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938664_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2144831
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4979	0.2321395019001497	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3894	0.1815527656957588	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	2923	0.1362811335718292	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	2856	0.13315734433155807	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2698	0.12579079657091863	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	2632	0.12271363105065154	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	2590	0.12075543481048158	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	2260	0.10536960720914608	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	2199	0.10252556028889923	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	2174	0.10135996728879804	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	2154	0.10042749288871711	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3125	59.68899	1
GTATCAA	5805	46.267254	1
ATCAACG	7755	34.320957	3
TATCAAC	7750	34.281773	2
TCAACGC	7875	33.858322	4
CAACGCA	8075	32.960102	5
AACGCAG	8490	31.340935	6
TGGTATC	1230	28.980732	2
ACGCAGA	9700	27.326414	7
CGCAGAG	9870	26.470716	8
TAAGGTG	1465	24.331379	5
AGGTAAG	1295	24.22297	2
GTACATG	7705	23.775307	1
TACATGG	7485	23.748323	2
GCAGAGT	11015	23.157934	9
ACATGGG	7520	22.81616	3
GTGGTAT	1815	22.604212	1
AAGGTAA	1330	22.597294	1
GTAAGGT	1530	22.366306	4
GGTAAGG	1450	22.289179	3