SRR938653_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938653_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1918108
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18741	0.9770565578163483	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13376	0.6973538507737833	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10158	0.5295843612559876	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4164	0.2170889230429152	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2833	0.14769762703664235	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2555	0.13320417828401737	No Hit
CTACTGGAACTGCACAAACTGGCTACTGACAAGAATGATCCCCACTTATG	2521	0.1314315982207467	No Hit
GTCCCAGGGTGTGCTTGTCAAAGAGATATTCTGCCATGCCAGCTTCAGGG	2488	0.12971115286521925	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6535	58.367035	1
GTATCAA	12545	45.53123	1
TATCAAC	17085	33.41011	2
ATCAACG	17195	33.196377	3
TCAACGC	17510	32.5449	4
CAACGCA	17855	31.889437	5
TGGTATC	2610	31.503258	2
GTGGTAT	2725	31.144167	1
AACGCAG	18340	31.069609	6
GTACATG	14665	28.02518	1
ACGCAGA	20590	27.45882	7
TACATGG	14840	27.447123	2
CGCAGAG	20770	27.175104	8
ACATGGG	15280	25.599197	3
GCAGAGT	21745	25.125711	9
CATGGGA	9580	24.309748	4
AGTACTT	13050	23.605713	12-13
GAGTACT	12870	23.271488	12-13
ATGGGAT	3585	23.068	5
AGGTAAG	600	22.17975	2