SRR938569_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938569_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2584820
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10095	0.390549438645631	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7766	0.30044645275106197	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5561	0.21514070612267006	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	3803	0.14712823330057798	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	3747	0.1449617381481109	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	3513	0.1359088834038734	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	3385	0.1309568944839486	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	3222	0.12465084609373187	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	3033	0.11733892495415542	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	2915	0.11277381016859973	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	2829	0.10944669261302528	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	5005	58.934605	1
GTATCAA	9795	44.51439	1
TATCAAC	13025	33.346992	2
ATCAACG	13325	32.524887	3
TCAACGC	13415	32.342106	4
CAACGCA	13705	31.623066	5
AACGCAG	14150	30.59024	6
TAAGGTG	1835	29.263788	5
GTAAGGT	1835	29.004818	4
AGGTAAG	1605	28.127867	2
ACGCAGA	15845	27.133764	7
AAGGTAA	1645	26.650522	1
CGCAGAG	16125	26.63314	8
TGGTATC	2140	25.759203	2
TACATGG	13070	25.74221	2
GTACATG	13390	25.694513	1
GGTAAGG	1895	25.077196	3
ACATGGG	13505	24.20929	3
GCAGAGT	17515	24.002783	9
TAAGGTA	790	23.459875	4