SRR938568_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938568_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2584253
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9384	0.36312234134970534	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7180	0.2778365740506057	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5129	0.19847127970829484	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	3706	0.1434070116199923	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	3698	0.14309744440656544	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	3527	0.13648044521956637	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	3191	0.1234786222556383	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	3181	0.1230916632388547	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	3097	0.11984120749787268	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	2960	0.11453986896793773	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	2758	0.10672329682890956	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	4865	59.49494	1
GTATCAA	9475	46.149216	1
TGGTATC	1895	36.366436	2
TATCAAC	12835	33.62265	2
ATCAACG	13130	32.903427	3
TCAACGC	13315	32.481956	4
CAACGCA	13605	31.684784	5
AACGCAG	14140	30.477695	6
TAAGGTG	1600	29.704483	5
GTGGTAT	2570	28.01677	1
AGGTAAG	1505	27.789974	2
ACGCAGA	16040	26.595743	7
GTAAGGT	1635	26.452433	4
CGCAGAG	16240	26.238956	8
GGTAAGG	1715	24.664246	3
TACATGG	12700	24.062971	2
AAGGTAA	1690	23.701008	1
GTACATG	12985	23.539124	1
GCAGAGT	17850	23.524965	9
ACATGGG	13375	22.066822	3