SRR938422_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938422_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3318771
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8730	0.2630491829656219	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7606	0.22918122401334712	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5066	0.1526468683738649	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	4850	0.14613843498090107	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	4736	0.14270342846794792	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	4725	0.14237198047108401	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	4515	0.1360443368945914	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	4421	0.13321196310320899	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	4151	0.1250764213620042	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	3598	0.1084136266105736	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	3520	0.10606335899644777	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	5875	50.84272	1
GTATCAA	10275	40.18046	1
ATCAACG	13425	30.380474	3
TATCAAC	13710	29.904305	2
TCAACGC	13675	29.859833	4
CAACGCA	13935	29.268595	5
AACGCAG	14415	28.269691	6
AGGTAAG	1950	24.878805	2
TAAGGTG	2175	24.696804	5
ACGCAGA	16710	24.330204	7
TACATGG	13600	24.27082	2
CGCAGAG	16880	24.028898	8
GTACATG	14290	23.898422	1
ACATGGG	13580	23.067854	3
GGTAAGG	2240	22.919086	3
GTAAGGT	2285	22.467726	4
AAGGTAA	2115	21.589268	1
TAAGGTA	1065	20.978275	4
GCAGAGT	19000	20.94782	9
CATGGGG	7755	20.902302	4