SRR938421_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938421_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3320319
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9190	0.2767806346317929	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7465	0.22482779516064572	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4973	0.14977476561740002	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	4927	0.1483893565648361	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	4878	0.14691359474797452	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	4499	0.13549902885837173	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	4223	0.1271865745429882	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	4058	0.1222171725066176	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	4005	0.12062094033735915	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	3618	0.10896543374296266	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	3555	0.10706802569271205	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	3504	0.10553202869965206	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	5695	52.980133	1
GTATCAA	10700	42.587013	1
TATCAAC	13565	33.071255	2
ATCAACG	13610	32.96191	3
TCAACGC	13840	32.34546	4
CAACGCA	14215	31.62589	5
AACGCAG	14690	30.696619	6
ACGCAGA	16835	26.581083	7
CGCAGAG	17065	26.08364	8
TACATGG	13745	25.65415	2
GTACATG	14485	24.94329	1
AGGTAAG	1920	24.503744	2
TAAGGTG	2335	24.422653	5
ACATGGG	14115	23.836958	3
TGGTATC	2730	23.500093	2
GCAGAGT	19120	22.559334	9
GTAAGGT	2345	21.886656	4
GGTAAGG	2300	21.695013	3
GTGTAAG	1330	21.50318	1
GTGTAGC	1870	21.411186	1