SRR938381_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938381_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3268797
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8226	0.2516522133372002	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	6686	0.20454008003556048	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	6675	0.20420356479769164	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6623	0.2026127654914025	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	6270	0.19181368558524742	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	5836	0.1785366298366035	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	5623	0.1720204711396884	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	5302	0.16220034465278815	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4807	0.1470571589486897	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	4717	0.14430385245703542	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	4444	0.13595215609901748	No Hit
CCTCAGACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGG	4305	0.1316998271841292	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	4279	0.13090442753098464	No Hit
TCCATGCCCTGAGTCCACCCCGGGGAAGGTGACAGCATTGCTTCTGTGTA	4168	0.12750868285794437	No Hit
GTGTAAATTATGTACTGCAAAAATTTTTTTAAATCTTCCGCCTTAATACT	3620	0.11074410555320506	No Hit
GGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGAAGGCT	3358	0.10272892443305595	No Hit
ATTATGTACTGCAAAAATTTTTTTAAATCTTCCGCCTTAATACTTCATTT	3344	0.10230063231213196	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	4460	54.495014	1
GTATCAA	8195	42.77493	1
AGGTAAG	2105	32.085365	2
TATCAAC	11095	31.294378	2
ATCAACG	11060	31.16502	3
TCAACGC	11125	31.068401	4
TAAGGTG	2325	30.877241	5
CAACGCA	11560	29.940434	5
AAGGTAA	2280	28.371008	1
AACGCAG	12210	28.24057	6
GGTAAGG	2640	27.373112	3
TGGTATC	2025	27.011179	2
GTAAGGT	2615	26.907574	4
GTGGTAT	2215	26.626781	1
TACATGG	10670	25.007437	2
GTACATG	11065	24.845467	1
ACGCAGA	13835	24.786234	7
CGCAGAG	13980	24.52915	8
ACATGGG	10755	23.38459	3
GTGTAAG	1135	21.791054	1