SRR938356_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938356_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3305834
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10672	0.32282322705858796	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8167	0.24704809739388003	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	6632	0.2006150339067237	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	6581	0.1990723067159452	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	6439	0.19477687022397375	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5858	0.17720188007020315	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	5633	0.17039573069912162	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	5301	0.1603528791826813	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	4940	0.14943279063619044	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	4921	0.14885804913374356	No Hit
GCCCAGGTCTGAGGCCTCCCTTTTTTTTGTCCCCCCAACTTGATGTATGA	4711	0.14250564305406743	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	4413	0.13349127633147945	No Hit
CCTCAGACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGG	4306	0.13025457418612066	No Hit
GTGTAAATTATGTACTGCAAAAATTTTTTTAAATCTTCCGCCTTAATACT	3962	0.11984872803655598	No Hit
GTATTAAGGCGGAAGATTTAAAAAAATTTTTGCAGTACATAATTTACACA	3682	0.1113788532636545	No Hit
TCCATGCCCTGAGTCCACCCCGGGGAAGGTGACAGCATTGCTTCTGTGTA	3456	0.10454245433981259	No Hit
CCTCAACCCCCTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGG	3392	0.10260648296314939	No Hit
CCTTAATACTTCATTTTTGTTTTTAATTTCTGAATGGCCCAGGTCTGAGG	3332	0.10079150979752764	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	5875	55.595062	1
GTATCAA	11100	44.116493	1
TATCAAC	14220	34.060028	2
ATCAACG	14365	33.65005	3
TCAACGC	14555	33.210785	4
CAACGCA	14930	32.344788	5
AACGCAG	15470	31.208193	6
TGGTATC	2640	28.446154	2
AGGTAAG	2145	27.919888	2
ACGCAGA	17575	27.275679	7
CGCAGAG	17665	27.05603	8
TAAGGTG	2555	26.97413	5
GTGGTAT	3085	26.120714	1
GTACATG	12790	25.313532	1
TACATGG	12690	24.944971	2
GTAAGGT	2695	24.514692	4
GGTAAGG	2590	24.407442	3
AAGGTAA	2315	24.304377	1
GCAGAGT	19420	24.046461	9
ACATGGG	13155	23.340601	3