SRR938289_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938289_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2968039
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14830	0.49965650720896865	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12449	0.4194351893624039	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8080	0.2722336195717105	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	4262	0.1435964958681473	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	3801	0.12806435494951382	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	3610	0.12162912953637066	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	3607	0.12152805269742076	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	3372	0.11361036697967916	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3178	0.10707406472758613	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	3039	0.1023908378562411	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	7410	51.926006	1
GTATCAA	12470	39.122097	1
TATCAAC	16070	30.092434	2
ATCAACG	16090	30.052496	3
TCAACGC	16275	29.710388	4
CAACGCA	16695	28.962954	5
AACGCAG	17100	28.304768	6
TAAGGTG	2070	26.388155	5
AGGTAAG	1925	24.923903	2
ACGCAGA	19360	24.877924	7
CGCAGAG	19560	24.623547	8
GGTAAGG	2090	24.545185	3
GTAAGGT	2145	24.136858	4
GAGTACT	13210	22.490479	12-13
GCAGAGT	21410	22.362383	9
TGGTATC	3570	22.221516	2
GTGTAAG	1245	22.129763	1
GTGGTAT	3775	21.76944	1
GTACTTT	13645	21.703867	14-15
AAGGTAA	2130	21.632675	1