SRR938262_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938262_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2560640
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12502	0.4882373156710822	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9860	0.38505998500374905	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6326	0.24704761309672585	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	3931	0.1535163084228943	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	3741	0.14609628842789305	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	3566	0.1392620594851287	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	3361	0.13125624843789052	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	3205	0.12516402149462635	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	2843	0.11102693076730817	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	2769	0.10813702824293928	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	2698	0.10536428392901775	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	5605	55.952347	1
GTATCAA	10035	43.04867	1
TATCAAC	13025	33.057106	2
ATCAACG	13040	32.94619	3
TGGTATC	2355	32.89357	2
TCAACGC	13260	32.39957	4
CAACGCA	13295	32.242786	5
AACGCAG	13900	30.93896	6
GTGGTAT	2775	28.382423	1
ACGCAGA	15570	27.459335	7
CGCAGAG	15705	27.072054	8
GTACATG	10135	26.469217	1
TACATGG	9895	26.175505	2
ACATGGG	10010	24.97273	3
GCAGAGT	16945	24.55688	9
TAAGGTG	1550	23.302162	5
GAGTACT	10900	23.010302	12-13
GTAAGGT	1615	22.364304	4
CAGAGTA	16235	21.826517	10-11
GTACTTT	11515	21.556992	14-15