SRR938210_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938210_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1237596
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6129	0.4952343090960216	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5533	0.4470764288184512	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3574	0.2887856780403298	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	1754	0.14172637920613834	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	1679	0.13566624326516893	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	1629	0.13162615263785596	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	1574	0.12718205294781174	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	1544	0.12475799857142396	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	1501	0.12128352063193482	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1494	0.120717907944111	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2505	59.728355	1
GTATCAA	4375	42.015606	1
TGGTATC	915	40.49032	2
GTGGTAT	1010	37.152107	1
TATCAAC	5795	31.638186	2
ATCAACG	5800	31.608358	3
TCAACGC	5970	30.946953	4
CAACGCA	6135	30.114641	5
AACGCAG	6375	28.980911	6
TAAGGTG	775	28.80307	5
AGGTAAG	755	26.422874	2
GTAAGGT	800	26.121935	4
ACGCAGA	7255	25.40019	7
CGCAGAG	7430	24.67409	8
GGTAAGG	865	23.060877	3
GCAGAGT	7980	22.735424	9
GTACATG	3880	22.402533	1
GAGTACT	5575	22.362844	12-13
AAGGTAA	875	21.713491	1
TACATGG	3840	21.646343	2