SRR938110_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR938110_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2770316
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14154	0.5109164441890384	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11696	0.4221901039448207	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7414	0.2676228993371153	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	3633	0.1311402742503021	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	3517	0.12695302629736102	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	3471	0.1252925659022292	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	3355	0.1211053179492881	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	3276	0.11825365770547476	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	2895	0.1045007139979699	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2832	0.10222660519594155	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6470	53.301712	1
GTATCAA	11550	42.360786	1
ATCAACG	14585	33.25099	3
TATCAAC	14795	32.845013	2
TCAACGC	14915	32.798958	4
CAACGCA	15040	32.43162	5
AACGCAG	15640	31.187443	6
ACGCAGA	17720	27.446207	7
CGCAGAG	17725	27.411669	8
TAAGGTG	1775	26.757635	5
TGGTATC	2785	25.75494	2
GCAGAGT	19400	24.824602	9
AGGTAAG	1750	23.886549	2
GTAAGGT	1755	23.815058	4
GTGGTAT	3110	23.674463	1
GAGTACT	12070	23.550653	12-13
TACATGG	10095	22.256845	2
CAGAGTA	18515	21.894037	10-11
GTACTTT	12960	21.878393	14-15
GTACATG	10595	21.744507	1