SRR937921_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937921_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1416244
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8024	0.5665690375387291	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7100	0.5013260426875595	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4511	0.31851856036106774	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	1882	0.13288670596309676	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	1876	0.1324630501523749	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1845	0.13027416179697848	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	1769	0.124907854861168	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	1758	0.12413115254151122	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	1681	0.11869423630391372	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	1462	0.10323079921256506	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3840	0.0	51.962395	1
GTATCAA	6295	0.0	36.678505	1
TAAGGTG	980	0.0	31.019371	5
TACGCTC	80	4.4950427E-4	29.686506	4
TATCAAC	7880	0.0	28.99946	2
ATCAACG	7985	0.0	28.612068	3
TCAACGC	8145	0.0	28.10833	4
GTAAGGT	1000	0.0	28.024063	4
CAACGCA	8275	0.0	27.66675	5
GTACCGT	70	0.008393587	27.141949	6
AACGCAG	8550	0.0	26.832438	6
GGACCGA	475	0.0	24.999163	6
AGGTAAG	950	0.0	24.50437	2
ACCGAGT	510	0.0	24.214876	8
ACGCAGA	9585	0.0	23.88548	7
CGCAGAG	9630	0.0	23.773867	8
GGTAAGG	1105	0.0	23.641743	3
AAGGTAA	995	0.0	22.918661	1
GAGTACT	6800	0.0	22.037865	12-13
GCAGAGT	10395	0.0	21.97858	9