SRR937803_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937803_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	589712
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7595	1.2879168136310606	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5651	0.9582643731177253	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3863	0.6550655235097811	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1447	0.2453740130775701	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1094	0.18551428493908892	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1091	0.18500556203706217	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	725	0.1229413679897984	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	701	0.1188715847735844	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	601	0.10191415470602598	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2700	0.0	50.5279	1
GTATCAA	4905	0.0	42.64094	1
ATCAACG	6265	0.0	33.370293	3
TATCAAC	6265	0.0	33.294453	2
TCAACGC	6345	0.0	33.02724	4
CAACGCA	6400	0.0	32.743416	5
AACGCAG	6490	0.0	32.205177	6
TAACGCT	60	0.0039417595	31.67919	4
GGTTGCG	60	0.003945042	31.673807	7
GCACCGT	135	4.2171632E-7	28.14971	6
ACGCAGA	7405	0.0	28.038057	7
CGCAGAG	7465	0.0	27.617071	8
GTGTACG	70	0.008358249	27.16283	1
CGCGATA	35	0.008392858	27.142057	22-23
GTACATG	4230	0.0	26.520685	1
GCAGAGT	7665	0.0	26.464905	9
TACATGG	4360	0.0	25.610014	2
GAGTACT	4690	0.0	25.222094	12-13
ACATGGG	4330	0.0	24.251177	3
GTACTTT	4955	0.0	23.869123	14-15