SRR937740_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937740_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	185605
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2003	1.0791735136445677	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1631	0.878747878559306	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1003	0.5403949247056922	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	379	0.20419708520783386	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	311	0.16756014115999032	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	300	0.16163357668166267	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	206	0.11098838932140838	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGATC	25	0.0049918722	57.065548	4
GGTATCA	695	0.0	50.67481	1
ACCCTAC	45	9.5118437E-4	42.305096	1
GTATCAA	1225	0.0	41.95975	1
TAGACTT	70	2.0361604E-4	33.958405	5
TATAAGG	70	2.0361604E-4	33.958405	2
CTCCGCA	60	0.0039359406	31.677385	9
TATCAAC	1620	0.0	31.401045	2
TCAACGC	1635	0.0	31.121374	4
ATCAACG	1635	0.0	31.104551	3
CAACGCA	1650	0.0	30.830116	5
GTACATG	1145	0.0	30.758945	1
GTCCAGG	140	1.657645E-8	30.59565	1
AACGCAG	1680	0.0	30.271395	6
TAGGACA	80	4.4491817E-4	29.721642	4
TACATGG	1165	0.0	29.382038	2
GTGTAAG	65	0.0057759397	29.288145	1
GTAGGGC	65	0.005814254	29.248564	3
GACTCCG	65	0.0058219405	29.240664	7
ACATGGG	1110	0.0	29.116814	3