SRR937740_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937740_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	185605
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1854	0.9988955038926753	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1593	0.8582742921796288	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1204	0.6486894210824062	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	401	0.2160502141644891	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	366	0.19719296355162844	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	292	0.15732334797015166	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTTAC	20	0.0020629272	71.32302	1
GGTATCA	1210	0.0	42.440144	1
TTTAGAC	70	4.2763604E-6	40.734035	3
GGTAAGG	75	6.8680656E-6	38.018436	3
CCTATGC	50	0.0016127533	37.99795	8
CATATAG	65	1.3201222E-4	36.55619	3
CCATATA	55	0.0025679602	34.562214	2
TAAGGTG	125	5.5715645E-9	34.21659	5
CATATAC	70	2.0409009E-4	33.94503	3
AGGTAAG	75	3.0598594E-4	31.68203	2
GTAAGGT	120	1.4879333E-7	31.682028	4
CTATGCT	60	0.003943536	31.66496	9
CGAGTCA	30	0.0039485786	31.66496	82-83
TCGAGTC	30	0.0039485786	31.66496	80-81
ATACAGC	60	0.003943536	31.66496	6
GTATCAA	1830	0.0	29.62049	1
TTAGACT	85	6.3686963E-4	27.954733	4
GATTGTG	70	0.0083759725	27.141392	7
TAGAGCG	45	8.9389033E-4	26.387466	18-19
GTACATG	1330	0.0	24.668112	1