SRR937706_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937706_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	137901
Sequences flagged as poor quality	0
Sequence length	101
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2485	1.802017389286517	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1886	1.3676478053096062	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1357	0.9840392745520337	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	493	0.3575028462447698	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	434	0.3147185299598988	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	372	0.2697587399656275	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	240	0.17403789675201775	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	199	0.14430642272354807	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	183	0.13270389627341353	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	177	0.1283529488546131	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	155	0.11239947498567814	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGATAGA	25	0.0049924157	57.05611	1
TTAGGCA	35	2.765818E-4	54.339157	4
AGGCTTA	65	4.3724867E-8	51.16696	6
TACCTGG	55	4.9223927E-5	43.208607	2
ACCCGGG	55	4.9329785E-5	43.192894	7
CGACCCG	45	9.5662393E-4	42.248413	5
GGTATCA	1095	0.0	37.776875	1
CATGGGT	90	5.606071E-7	36.980816	4
GACCCGG	65	1.3201185E-4	36.547832	6
ACTATAC	55	0.0025639553	34.566887	3
CTAGATC	70	2.03219E-4	33.96197	4
TATACAA	85	1.614945E-5	33.55021	5
CATGGGG	185	0.0	33.411236	4
GTATCAA	1665	0.0	33.12567	1
ATATAGG	115	1.01956175E-7	33.063976	2
CTATACA	60	0.003920034	31.697838	4
ATGTTAT	60	0.003920034	31.697838	1
CCCGACC	60	0.0039270273	31.68631	3
CCGGGGA	75	3.05987E-4	31.674788	9
ACAATCA	60	0.00393403	31.674788	8