SRR937704_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937704_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	74773
Sequences flagged as poor quality	0
Sequence length	101
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1659	2.2187153116766747	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1226	1.6396292779479225	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	960	1.2838858946411138	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	360	0.4814572104904177	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	289	0.3865031495325853	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	281	0.375804100410576	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	162	0.21665574472068796	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	136	0.18188383507415778	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	133	0.1778716916534043	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	121	0.16182311797039037	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCGTTC	15	6.595298E-4	94.993286	8
ATCGTAT	20	0.002067027	71.244965	8
TCGTATG	20	0.002067027	71.244965	9
AGTATCG	25	0.004977749	57.072582	5
CTGCACT	25	0.004977749	57.072582	4
AGTTTGA	25	0.00500431	56.99597	6
GTATCGT	25	0.00500431	56.99597	6
GGTATCA	460	0.0	49.628326	1
GGGATCT	45	9.570463E-4	42.21924	7
TGGGATC	70	4.2581214E-6	40.71141	6
GTATCAA	800	0.0	38.642895	1
GTACATG	515	0.0	36.94018	1
ATGGGGA	55	0.0025482604	34.589443	5
ATGGGAC	55	0.0025482604	34.589443	5
TACATGG	550	0.0	33.724705	2
CATGGGG	85	1.5978838E-5	33.572105	4
ACATGGG	535	0.0	32.892296	3
ATGGGAG	105	1.8517749E-6	31.70699	5
GCCAAAA	30	0.0039413827	31.66443	36-37
CATGGGA	450	0.0	30.650091	4