SRR937694_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937694_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	119921
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1346	1.1224055836759201	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1102	0.9189383010481901	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	810	0.6754446677395952	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	648	0.5403557341916763	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	555	0.46280467974750045	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	292	0.2434936333085948	No Hit
GTCCCAGGGTGTGCTTGTCAAAGAGATATTCTGCCATGCCAGCTTCAGGG	260	0.21680939952135156	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	214	0.17845081345218936	No Hit
GGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA	209	0.1742814019229326	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	171	0.1425938743005812	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	136	0.11340799359578389	No Hit
TGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCT	132	0.11007246437237847	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	131	0.10923858206652715	No Hit
CTACTGGAACTGCACAAACTGGCTACTGACAAGAATGATCCCCACTTATG	127	0.10590305284312172	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAAGGG	25	5.2582527E-5	75.99366	2
GGACCGA	25	0.0050119967	56.995247	6
CATCGGT	20	5.3707545E-4	47.515854	86-87
AGGGTAG	45	9.594503E-4	42.2187	5
TAAGGGT	45	9.594503E-4	42.2187	3
GGTGTGC	105	1.0113581E-9	40.710888	8
GACCGAG	50	0.0016107084	37.99683	7
TAAGGTG	50	0.0016107084	37.99683	5
GGTAGTT	50	0.0016107084	37.99683	7
AGGGTGT	120	3.7362042E-9	35.62203	6
CCAGGGT	95	8.619445E-7	34.997078	4
TTGCGTA	50	1.2943601E-6	33.247227	60-61
GCGTAAG	50	1.2943601E-6	33.247227	62-63
TGCGTAA	50	1.2943601E-6	33.247227	60-61
CAGGGTG	120	1.487897E-7	31.664026	5
AAGGGTA	60	0.003938583	31.664026	4
CTTGCGT	55	2.72334E-6	30.224752	58-59
GCTATAC	65	0.0058021406	29.25273	1
GACACGG	65	0.005825865	29.228333	7
GGGTAGT	65	0.005825865	29.228333	6