SRR937650_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937650_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1045621
Sequences flagged as poor quality	0
Sequence length	101
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5954	0.569422381532123	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4996	0.47780218645187883	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3524	0.3370246006918377	No Hit
TACTAACAGTGTTGCATCTATAAAGTTATAGATTAACCCAATTTTAAGTT	1177	0.11256468643992422	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1160	0.11093885834351071	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1152	0.11017376276872787	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1053	0.10070570503079032	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3170	0.0	39.133987	1
TAGCACG	65	1.3260706E-4	36.547974	4
GTATCAA	5040	0.0	33.57317	1
GCGAGCT	75	3.077878E-4	31.667337	9
CCGCGAT	60	0.0039503807	31.667336	9
GCCGCGA	65	0.005843231	29.231388	8
ATGGGCG	115	3.8563066E-6	28.92057	5
TCAACGC	5940	0.0	28.155476	4
GGCGAGC	85	6.4059976E-4	27.941767	8
CATTCCG	290	0.0	27.845415	9
CAACGCA	6025	0.0	27.83712	5
ATCAACG	6070	0.0	27.552475	3
AACGCAG	6110	0.0	27.441984	6
TATCAAC	6265	0.0	26.846571	2
ACGCAGA	6890	0.0	24.267567	7
GTACATG	3645	0.0	23.993475	1
CGCAGAG	6970	0.0	23.92088	8
TACATGG	3690	0.0	22.790482	2
GAGTACT	4745	0.0	22.424078	12-13
GCAGAGT	7510	0.0	22.137619	9