SRR937598_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937598_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	311859
Sequences flagged as poor quality	0
Sequence length	101
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4512	1.4468076919377026	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3740	1.1992599219519078	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2873	0.9212496673176019	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1755	0.5627543216645985	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1152	0.369397708579839	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	918	0.29436379902455917	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	821	0.2632599989097637	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	750	0.24049329985666598	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	387	0.12409454272603966	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	355	0.11383349526548857	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAACG	20	0.002070519	71.268524	2
GGTATCA	1865	0.0	41.787	1
GTATCAA	2925	0.0	34.766747	1
GTATAGC	185	0.0	33.39241	1
TCCGCGC	30	0.0039445558	31.674898	94-95
ATAGGGG	60	0.003941557	31.674898	3
TACTAGG	100	4.9329446E-5	28.507408	2
TATCAAC	3605	0.0	28.072483	2
GTATATA	290	0.0	27.856535	1
ATCAACG	3635	0.0	27.840797	3
GTAGGAC	240	0.0	27.715536	3
TCAACGC	3700	0.0	27.351704	4
CAACGCA	3710	0.0	27.27798	5
GTACTAG	105	6.870277E-5	27.15427	1
CACGACC	35	0.008378047	27.149914	94-95
TAGCCCT	280	0.0	27.149914	4
ACGACCC	35	0.008378047	27.149914	94-95
CCTCGGA	35	0.008391165	27.141209	30-31
TGTAGGA	325	0.0	26.314531	2
AACGCAG	3875	0.0	26.230663	6