SRR937549_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937549_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	208618
Sequences flagged as poor quality	0
Sequence length	101
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3676	1.7620723044032633	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3155	1.512333547440777	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2378	1.13988246460037	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1695	0.812489813918262	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	705	0.33793824118724175	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	675	0.323557890498423	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	616	0.295276534143746	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	415	0.19892818452866007	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	382	0.18310979877095937	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	339	0.16249796278365242	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	301	0.14428285191114862	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	222	0.1064145950972591	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGTAC	15	6.6052965E-4	95.01798	3
CTCTACG	25	0.0050117737	57.010788	2
GGTAAGG	45	1.5099622E-5	52.78777	3
GTAAGGT	45	1.5099622E-5	52.78777	4
TAAGGTG	85	1.2732926E-10	50.30364	5
GGTATCA	2125	0.0	42.25505	1
GCATAAG	50	0.0016112851	38.007195	3
GACCATG	50	0.0016112851	38.007195	7
GGTGTGC	120	3.754394E-9	35.631744	8
ACGCAGG	55	0.0025724184	34.55199	7
TATAAGA	55	0.0025724184	34.55199	2
TAAGTAC	85	1.623726E-5	33.53576	3
ACTGGGC	60	0.0039399527	31.67266	8
GTATCAA	3135	0.0	31.521116	1
AGGTAAG	80	4.4762128E-4	29.69312	2
CTGGGCG	65	0.005827862	29.2363	9
CTAACCT	70	0.008368374	27.147997	4
GAGCCGA	70	0.008368374	27.147997	9
GTAAGTA	70	0.008368374	27.147997	2
GGGACTC	90	8.913056E-4	26.393885	7