SRR937513_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937513_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	478555
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4114	0.8596713021491783	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3010	0.6289768156220288	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2157	0.4507318907962512	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	958	0.2001859765335228	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	956	0.19976805173908957	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	737	0.15400528674864958	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	721	0.15066188839318365	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	679	0.14188546771008556	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	567	0.11848167922182402	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	513	0.1071977097721265	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	4225	0.0	35.115047	1
GGTATCA	2625	0.0	32.78798	1
GGCCGTT	65	0.0058455747	29.225777	7
ATCAACG	5205	0.0	28.306019	3
TATCAAC	5230	0.0	28.264545	2
TCAACGC	5295	0.0	27.91173	4
CAACGCA	5325	0.0	27.843723	5
AACGCAG	5485	0.0	27.190542	6
GATGTGC	270	1.8189894E-12	24.628	8
ACGCAGA	6095	0.0	24.31086	7
GTACATG	3060	0.0	24.242008	1
CGCAGAG	6115	0.0	24.156212	8
GGTGTGC	515	0.0	23.978998	8
GGACCGA	100	0.0016528715	23.748428	6
AAATCGA	70	1.7807055E-5	23.747185	80-81
GAGTACT	3040	0.0	23.433496	12-13
TACATGG	3135	0.0	23.348904	2
ATGTGCA	330	0.0	23.02878	9
ACATGGG	3150	0.0	22.933529	3
AGTACTT	3120	0.0	22.908747	12-13