SRR937497_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937497_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	326661
Sequences flagged as poor quality	0
Sequence length	101
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3773	1.15502003606185	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3035	0.9290977496548409	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2540	0.7775645087720909	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1479	0.4527629560920955	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	906	0.27735174997933637	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	838	0.25653506234291823	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	566	0.17326831179724544	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	539	0.16500286229455	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	419	0.12826753117145911	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	382	0.11694080407517274	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1495	0.0	43.240314	1
CATTCCG	70	4.294041E-6	40.723473	9
GCTTCGT	50	0.0016123343	38.008575	8
GTATCAA	2505	0.0	36.052635	1
GTGCTAC	80	1.070211E-5	35.649414	1
GTTTAAG	75	3.0613306E-4	31.688368	1
CGCAGAA	60	0.003942491	31.673811	9
GTAAGAC	60	0.003942491	31.673811	3
GTGTAGC	110	2.7110345E-6	30.247988	1
GTACCAC	95	3.4779143E-5	30.00677	3
GGACCCC	80	4.4887958E-4	29.685108	6
GGCTTCG	65	0.005831595	29.237364	7
ATCAACG	3135	0.0	28.642824	3
CCCTATA	150	3.3140168E-8	28.506432	2
TCAACGC	3170	0.0	28.32658	4
CAACGCA	3205	0.0	28.165482	5
CAATGGG	135	4.2012107E-7	28.154501	9
TATCAAC	3205	0.0	28.017242	2
AACGCAG	3270	0.0	27.742413	6
ACGCAGC	70	0.008373709	27.148983	7