SRR937323_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937323_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	124245
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1035	0.8330315103223469	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	877	0.7058634150267616	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	518	0.4169181858424886	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	257	0.20684937019598373	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	226	0.18189866795444487	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	185	0.14889935208660307	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	171	0.13763129300977905	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	171	0.13763129300977905	No Hit
CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGC	145	0.11670489758139159	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	460	0.0	47.535713	1
GTATCAA	900	0.0	44.36667	1
TATACAG	80	2.2347194E-7	41.576973	5
TACCTGG	65	1.3186554E-4	36.55118	2
ATGGGAC	80	1.0673288E-5	35.637405	5
TAGGTTG	55	0.0025664077	34.557484	5
ATCAACG	1145	0.0	34.4443	3
TATCAAC	1150	0.0	34.294548	2
CAACGCA	1155	0.0	34.146088	5
TCAACGC	1160	0.0	33.9989	4
AACGCAG	1165	0.0	33.852985	6
ATGTAAG	60	0.003923018	31.690477	1
AGGGTAG	60	0.00393078	31.67769	5
GCACCCG	60	0.00393078	31.67769	9
CGCAGAG	1300	0.0	29.971972	8
GTACATG	620	0.0	29.901499	1
ACGCAGA	1310	0.0	29.743176	7
GTCCTGG	80	4.4511547E-4	29.709822	1
GCAGAGT	1315	0.0	29.630085	9
TCCATAT	65	0.005802881	29.252747	1