SRR937322_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937322_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	117200
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1050	0.8959044368600683	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	864	0.7372013651877133	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	522	0.4453924914675768	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	212	0.18088737201365188	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	209	0.17832764505119453	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	179	0.15273037542662116	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	156	0.13310580204778155	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	142	0.12116040955631399	No Hit
TGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCT	121	0.10324232081911262	No Hit
CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGC	119	0.10153583617747441	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGCAT	45	2.0300831E-7	63.340454	5
TTAGGCA	40	5.365264E-4	47.50534	4
TTAGGGC	50	0.0016090004	38.004272	3
GTATAGC	65	1.3167129E-4	36.558193	1
ATGGGAT	175	0.0	35.289684	5
GCATTCC	55	0.0025687884	34.54934	8
CAGTGCA	70	2.0407706E-4	33.93239	9
GGTATCA	830	0.0	33.210693	1
ATGGGGA	85	6.3683867E-4	27.944319	5
ACAGTGC	70	0.008356751	27.14591	8
CTACACT	70	0.008356751	27.14591	4
GTACATG	530	0.0	26.901312	1
TACATGG	555	0.0	26.534515	2
GTATCAA	1150	0.0	24.795994	1
GAGATGG	135	1.3282108E-5	24.6324	9
GAGTACT	765	0.0	24.218409	12-13
CATGGGA	370	0.0	23.110708	4
ACATGGG	540	0.0	22.872944	3
ATTAGGG	105	0.0021831086	22.621592	2
CAGAGTG	105	0.0021831086	22.621592	4