SRR937311_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937311_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	88833
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	894	1.0063827631623383	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	667	0.7508470951110511	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	395	0.4446545765650152	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	188	0.2116330642891718	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	130	0.14634201254038476	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	127	0.1429648891740682	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	118	0.13283351907511848	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	100	0.11257077887721904	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGATAC	25	0.0049990825	57.019985	1
CTTGTAC	25	0.005010274	56.98781	3
TAAGCAC	25	0.005010274	56.98781	3
ATATAGA	50	2.7999338E-5	47.516655	1
GGTATCA	370	0.0	43.663956	1
TTCAGAC	45	9.5870637E-4	42.213192	4
CTTAGGA	45	9.5870637E-4	42.213192	2
GTATCAA	645	0.0	40.518078	1
CATGGGC	90	5.6286626E-7	36.936543	4
TATCAAC	815	0.0	32.04836	2
ATCTTGA	75	3.0494476E-4	31.67777	1
TCTTGAT	60	0.0039355904	31.659897	2
CAACGCA	845	0.0	30.928003	5
ATCAACG	845	0.0	30.91055	3
TCAACGC	845	0.0	30.91055	4
CGGTGGT	40	4.4766875E-4	29.68953	92-93
AACGCAG	890	0.0	29.364227	6
TCAGACA	65	0.0058054132	29.24102	5
GTGGTCG	35	0.008358446	27.152374	94-95
GCCACGT	35	0.008381505	27.137053	42-43