SRR937310_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937310_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	82131
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	894	1.0885049494100887	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	705	0.858384775541513	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	440	0.5357295053025045	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	156	0.18994046097088796	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	139	0.1692418209932912	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	115	0.1400202116131546	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	101	0.12297427280807491	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	94	0.11445130340553505	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	90	0.10958103517551229	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	340	0.0	55.90354	1
CGACCCG	40	5.332637E-4	47.54704	5
TCCCGAC	40	5.3487363E-4	47.51801	2
CCCGACC	40	5.3487363E-4	47.51801	3
CAATGCA	45	9.5548783E-4	42.23823	9
CCGACCC	50	0.0015992648	38.037632	4
CTCCCGA	50	0.0016040759	38.014412	1
GTATCAA	555	0.0	37.671936	1
GTACAGA	60	0.0039224625	31.678675	1
GCTTTAT	60	0.0039224625	31.678675	1
ATGGGAG	125	2.0945481E-7	30.430105	5
CTGGGAG	65	0.0057847807	29.259716	5
TATCAAC	795	0.0	26.896986	2
TACATGG	460	0.0	24.792006	2
GTACATG	465	0.0	24.525425	1
CAACGCA	855	0.0	24.46865	5
ATCAACG	855	0.0	24.453712	3
AACGCAG	865	0.0	24.171013	6
GAGTACT	620	0.0	24.142216	12-13
CATGGGA	355	0.0	24.108356	4