SRR937310_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937310_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	82131
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	676	0.823075330873848	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	587	0.7147118627558412	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373	0.4541525124496231	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	212	0.25812421619120673	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	196	0.23864314327111563	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	135	0.16437155276326842	No Hit
GCTAAGGGTAGTTTATTTTGGACACAGACATATTAGGGCATTGTCACCAC	101	0.12297427280807491	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	97	0.11810400457805212	No Hit
GGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA	95	0.11566887046304075	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGGTG	40	7.4326344E-6	59.443214	5
AGATTGA	25	0.005006124	56.995987	6
TAGGATT	35	2.7736503E-4	54.281883	7
AGGTAAG	45	1.4933592E-5	52.838413	2
GGTAAGG	40	5.32853E-4	47.554573	3
GTAAGGT	50	2.7849424E-5	47.554573	4
AAGGTGT	50	2.805106E-5	47.496655	6
GGTATCA	505	0.0	43.343464	1
CTATACT	45	9.5188466E-4	42.27073	4
TAGCCAG	45	9.5188466E-4	42.27073	5
CCCTGAG	55	0.002566643	34.54302	7
GTATCAA	785	0.0	33.94498	1
AAGGTAA	80	4.4120522E-4	29.739742	1
GGTGTGC	65	0.0058149337	29.228708	8
ATAGGAT	65	0.0058149337	29.228708	6
GTGTGCA	65	0.0058149337	29.228708	9
TATCAAC	915	0.0	29.104439	2
GTGCACT	50	4.9300135E-5	28.497993	10-11
ATCAACG	970	0.0	27.944439	3
TACAGAG	70	0.008300374	27.174042	5