SRR937308_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937308_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	183698
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1497	0.8149244956395824	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1126	0.6129625798865529	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	708	0.3854151923265359	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	292	0.15895654824766736	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	245	0.1333710764406798	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	234	0.12738298729436356	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	234	0.12738298729436356	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	202	0.10996309159598908	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCGT	25	0.0050105494	57.01148	6
GGTATCA	800	0.0	43.352478	1
GGACCAT	45	9.594312E-4	42.23073	6
GTAGTCG	25	0.001614947	37.99727	46-47
GTATCAA	1335	0.0	37.722954	1
CGGGAGT	55	0.0025714398	34.552418	4
GTCTTAT	60	0.0039384617	31.673046	1
TATCAAC	1595	0.0	31.565128	2
ATCAACG	1630	0.0	30.595959	3
ATGGGAT	350	0.0	29.86316	5
TCAACGC	1655	0.0	29.854956	4
CAACGCA	1665	0.0	29.675648	5
AACGCAG	1680	0.0	29.410686	6
TGGCCTA	65	0.0058256625	29.23666	5
GGACAGT	120	5.3409203E-6	27.713915	6
TAATAGA	70	0.008365234	27.148323	6
TGGACCA	70	0.008365234	27.148323	5
GCTCGAT	35	0.00838717	27.140903	46-47
GTGTAGC	90	8.908213E-4	26.394205	1
ATAACAG	90	8.908213E-4	26.394205	5