SRR937307_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937307_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	155844
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	866	0.5556838890172224	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	661	0.4241420908087575	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	426	0.27335027335027334	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	229	0.14694181360848027	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	228	0.1463001463001463	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	208	0.13346680013346682	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	181	0.11614178280844947	No Hit
CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGC	179	0.11485844819178154	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	164	0.10523343856677189	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATACA	40	5.362876E-4	47.519466	1
GTATATA	60	1.4797188E-6	47.519463	1
AGGTAAG	50	0.0016108229	38.003345	2
AAGGTAA	70	2.0402834E-4	33.942474	1
TAAGGTG	105	1.886423E-6	31.669455	5
GTATCAA	925	0.0	29.795988	1
AATTGAA	80	4.473674E-4	29.690115	2
GTCATAC	65	0.005817077	29.24275	1
ACTGGAC	65	0.0058262344	29.233341	3
GGTAAGG	100	4.923021E-5	28.50251	3
CTACTCC	70	0.008366063	27.145247	4
CCCTGTA	70	0.008366063	27.145247	2
TTATACT	110	9.419406E-5	25.911371	4
GTATTTA	95	0.0012188717	25.010244	1
TTTATGG	95	0.0012211615	25.0022	3
GTACAAA	115	1.2712546E-4	24.792765	1
GTAAGGT	115	1.2740368E-4	24.78479	4
CAACGCA	1085	0.0	24.518288	5
ATCAACG	1090	0.0	24.405817	3
AACGCAG	1095	0.0	24.294376	6