SRR937306_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937306_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	140895
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	730	0.5181163277618085	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	633	0.4492707335249654	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	464	0.3293232549061358	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	400	0.28389935767770325	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	213	0.151176407963377	No Hit
GGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA	192	0.13627169168529757	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	156	0.11072074949430427	No Hit
TGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCT	148	0.1050427623407502	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGGTG	105	0.0	49.76153	5
ATAACAT	40	5.372193E-4	47.499645	3
AAGGTAA	65	2.5607187E-6	43.876976	1
TATAGAC	50	0.0016110649	37.999714	3
GTAAGGT	115	2.4701876E-9	37.173637	4
ACTACAT	55	0.0025720743	34.545197	3
GGTAAGG	115	1.02550985E-7	33.043232	3
CTCTAGA	60	0.0039257566	31.688929	1
TACATGG	540	0.0	30.786808	2
GGTGTGC	125	2.1314008E-7	30.399775	8
AGGTAAG	95	3.4695448E-5	29.999777	2
AGGTGTG	175	1.4915713E-10	29.856918	7
CTTAAGG	65	0.005827119	29.23055	3
TAGACTG	65	0.005827119	29.23055	5
GTACATG	570	0.0	28.353252	1
TTATTGG	110	1.8189894E-12	28.06797	18-19
ACATGGG	525	0.0	28.04741	3
GTGTGGC	105	6.830825E-5	27.16194	1
TCTAAGA	70	0.008367337	27.142654	2
GTGTGCA	175	4.8821676E-9	27.142653	9