SRR937305_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937305_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	209918
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	985	0.46923084251946	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	874	0.4163530521441706	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	650	0.3096447184138569	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	589	0.28058575253194107	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	273	0.13005078173381987	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	257	0.12242875789594031	No Hit
GGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA	228	0.10861383968978364	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTATGG	45	9.588703E-4	42.238636	2
ATAAGAC	65	1.3214607E-4	36.55267	3
GTCTTAG	95	8.5965075E-7	35.030308	1
GTGTTAT	55	0.0025639334	34.575367	1
CTATAAC	70	2.0429652E-4	33.94176	3
AGACCGT	70	2.0486953E-4	33.92559	6
GACCGTG	65	0.00583584	29.228205	7
GGTATCA	1410	0.0	28.996717	1
GTGTAAG	85	6.3573336E-4	27.96537	1
TAACTCC	70	0.00836035	27.15341	4
GCCTAGC	35	0.008384328	27.143705	94-95
GTGTAGA	145	7.7771074E-7	26.229588	1
GTACTGA	160	1.8336468E-6	23.770565	1
AGGTAAG	100	0.0016454313	23.759235	2
TAAAGCC	100	0.0016454313	23.759235	4
GCCCCTT	100	0.0016500041	23.747915	6
ACAGCTC	140	1.7717111E-5	23.747913	8
GAGTACT	1070	0.0	23.082087	12-13
ATTATTC	125	2.24147E-4	22.808867	3
GTATCAA	1795	0.0	22.76651	2